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Cluster: HRGMv2_2156_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2156_7 HRGMv2_2156_7_3 1929 2930 - 8.A.5.1.6
CAZyme HRGMv2_2156_7 HRGMv2_2156_7_4 2944 5097 - GH112
pfam HRGMv2_2156_7 HRGMv2_2156_7_5 5090 5764 - Lipase_GDSL | Lipase_GDSL_2
TC HRGMv2_2156_7 HRGMv2_2156_7_6 5764 7506 - 8.A.59.2.1
TF HRGMv2_2156_7 HRGMv2_2156_7_7 7516 9024 - HTH_AraC | HTH_AraC
TC HRGMv2_2156_7 HRGMv2_2156_7_8 9115 9930 - 3.A.1.1.23
TC HRGMv2_2156_7 HRGMv2_2156_7_9 9933 10841 - 3.A.1.1.34
Gene ID: HRGMv2_2156_7_3
Type: TC
Location: 1929 - 2930 (-)
Gene ID: HRGMv2_2156_7_4
Type: CAZyme
Location: 2944 - 5097 (-)
Gene ID: HRGMv2_2156_7_5
Type: pfam
Location: 5090 - 5764 (-)
Gene ID: HRGMv2_2156_7_6
Type: TC
Location: 5764 - 7506 (-)
Gene ID: HRGMv2_2156_7_7
Type: TF
Location: 7516 - 9024 (-)
Gene ID: HRGMv2_2156_7_8
Type: TC
Location: 9115 - 9930 (-)
Gene ID: HRGMv2_2156_7_9
Type: TC
Location: 9933 - 10841 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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