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Cluster: HRGMv2_2156_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2156_1 HRGMv2_2156_1_85 104793 105320 + 9.B.156.3.1
pfam HRGMv2_2156_1 HRGMv2_2156_1_86 105356 106096 - Acyltransferase
pfam HRGMv2_2156_1 HRGMv2_2156_1_87 106224 106628 + PrcB_C
CAZyme HRGMv2_2156_1 HRGMv2_2156_1_88 106668 108224 + CBM50
pfam HRGMv2_2156_1 HRGMv2_2156_1_89 108297 109160 + GHMP_kinases_N | GHMP_kinases_C
TF HRGMv2_2156_1 HRGMv2_2156_1_90 109181 109873 + GntR
TC HRGMv2_2156_1 HRGMv2_2156_1_91 109966 111483 + 9.A.11.1.2
Gene ID: HRGMv2_2156_1_85
Type: TC
Location: 104793 - 105320 (+)
Gene ID: HRGMv2_2156_1_86
Type: pfam
Location: 105356 - 106096 (-)
Gene ID: HRGMv2_2156_1_87
Type: pfam
Location: 106224 - 106628 (+)
Gene ID: HRGMv2_2156_1_88
Type: CAZyme
Location: 106668 - 108224 (+)
Gene ID: HRGMv2_2156_1_89
Type: pfam
Location: 108297 - 109160 (+)
Gene ID: HRGMv2_2156_1_90
Type: TF
Location: 109181 - 109873 (+)
Gene ID: HRGMv2_2156_1_91
Type: TC
Location: 109966 - 111483 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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