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Cluster: HRGMv2_2156_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2156_5 HRGMv2_2156_5_188 194796 196427 + 9.B.33.1.1
STP HRGMv2_2156_5 HRGMv2_2156_5_189 196533 197798 + SBP_bac_1
TC HRGMv2_2156_5 HRGMv2_2156_5_190 197868 198758 + 3.A.1.1.42
TC HRGMv2_2156_5 HRGMv2_2156_5_191 198755 199588 + 3.A.1.1.18
CAZyme HRGMv2_2156_5 HRGMv2_2156_5_192 199602 201527 + PL27
CAZyme HRGMv2_2156_5 HRGMv2_2156_5_193 201511 203598 + GH112
TF HRGMv2_2156_5 HRGMv2_2156_5_194 203654 204271 - 0042546
TC HRGMv2_2156_5 HRGMv2_2156_5_195 204328 205671 - 2.A.66.1.33
Gene ID: HRGMv2_2156_5_188
Type: TC
Location: 194796 - 196427 (+)
Gene ID: HRGMv2_2156_5_189
Type: STP
Location: 196533 - 197798 (+)
Gene ID: HRGMv2_2156_5_190
Type: TC
Location: 197868 - 198758 (+)
Gene ID: HRGMv2_2156_5_191
Type: TC
Location: 198755 - 199588 (+)
Gene ID: HRGMv2_2156_5_192
Type: CAZyme
Location: 199602 - 201527 (+)
Gene ID: HRGMv2_2156_5_193
Type: CAZyme
Location: 201511 - 203598 (+)
Gene ID: HRGMv2_2156_5_194
Type: TF
Location: 203654 - 204271 (-)
Gene ID: HRGMv2_2156_5_195
Type: TC
Location: 204328 - 205671 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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