dbCAN Logo

Cluster: HRGMv2_2156_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2156_5 HRGMv2_2156_5_58 62377 63357 + GH43_26
STP HRGMv2_2156_5 HRGMv2_2156_5_59 63560 64951 + SBP_bac_1
TC HRGMv2_2156_5 HRGMv2_2156_5_60 65027 65953 + 3.A.1.1.34
TC HRGMv2_2156_5 HRGMv2_2156_5_61 65965 66834 + 3.A.1.1.11
CAZyme HRGMv2_2156_5 HRGMv2_2156_5_62 66839 68185 + GH43_4
TF HRGMv2_2156_5 HRGMv2_2156_5_63 68231 69154 + HTH_5
CAZyme HRGMv2_2156_5 HRGMv2_2156_5_64 69226 70692 + GH43_4
CAZyme HRGMv2_2156_5 HRGMv2_2156_5_65 70710 72212 + GH51_1
TC HRGMv2_2156_5 HRGMv2_2156_5_66 72524 73786 - 2.A.40.1.1
CAZyme HRGMv2_2156_5 HRGMv2_2156_5_67 73995 76154 + GH112
Gene ID: HRGMv2_2156_5_58
Type: CAZyme
Location: 62377 - 63357 (+)
Gene ID: HRGMv2_2156_5_59
Type: STP
Location: 63560 - 64951 (+)
Gene ID: HRGMv2_2156_5_60
Type: TC
Location: 65027 - 65953 (+)
Gene ID: HRGMv2_2156_5_61
Type: TC
Location: 65965 - 66834 (+)
Gene ID: HRGMv2_2156_5_62
Type: CAZyme
Location: 66839 - 68185 (+)
Gene ID: HRGMv2_2156_5_63
Type: TF
Location: 68231 - 69154 (+)
Gene ID: HRGMv2_2156_5_64
Type: CAZyme
Location: 69226 - 70692 (+)
Gene ID: HRGMv2_2156_5_65
Type: CAZyme
Location: 70710 - 72212 (+)
Gene ID: HRGMv2_2156_5_66
Type: TC
Location: 72524 - 73786 (-)
Gene ID: HRGMv2_2156_5_67
Type: CAZyme
Location: 73995 - 76154 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List