Cluster: HRGMv2_2154_CGC3

🧬 Cluster Details

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	HRGMv2_2154_7	HRGMv2_2154_7_174	152255	153076	-	GT2
pfam	HRGMv2_2154_7	HRGMv2_2154_7_175	153076	153903	-	LicD
TC	HRGMv2_2154_7	HRGMv2_2154_7_176	153906	155294	-	9.B.18.1.3
CAZyme	HRGMv2_2154_7	HRGMv2_2154_7_177	155564	156625	+	GT2
CAZyme	HRGMv2_2154_7	HRGMv2_2154_7_178	156627	157640	-	GT2
TC	HRGMv2_2154_7	HRGMv2_2154_7_179	157646	158377	-	3.A.1.103.4
NULL(UNKNOWN)	HRGMv2_2154_7	HRGMv2_2154_7_180	158380	159162	-	NULL(UNKNOWN) [View Structural Homologs]
pfam	HRGMv2_2154_7	HRGMv2_2154_7_181	159159	159575	-	CTP_transf_like
CAZyme	HRGMv2_2154_7	HRGMv2_2154_7_182	159601	161922	-	GT2 \| GT2
CAZyme	HRGMv2_2154_7	HRGMv2_2154_7_183	161953	163068	-	GT2
CAZyme	HRGMv2_2154_7	HRGMv2_2154_7_184	163107	165026	-	GT2 \| GT2

Gene ID: HRGMv2_2154_7_174
Type: CAZyme
Location: 152255 - 153076 (-)

Gene ID: HRGMv2_2154_7_175
Type: pfam
Location: 153076 - 153903 (-)

Gene ID: HRGMv2_2154_7_176
Type: TC
Location: 153906 - 155294 (-)

Gene ID: HRGMv2_2154_7_177
Type: CAZyme
Location: 155564 - 156625 (+)

Gene ID: HRGMv2_2154_7_178
Type: CAZyme
Location: 156627 - 157640 (-)

Gene ID: HRGMv2_2154_7_179
Type: TC
Location: 157646 - 158377 (-)

Gene ID: HRGMv2_2154_7_180
Type:
Location: 158380 - 159162 (-)

Gene ID: HRGMv2_2154_7_181
Type: pfam
Location: 159159 - 159575 (-)

Gene ID: HRGMv2_2154_7_182
Type: CAZyme
Location: 159601 - 161922 (-)

Gene ID: HRGMv2_2154_7_183
Type: CAZyme
Location: 161953 - 163068 (-)

Gene ID: HRGMv2_2154_7_184
Type: CAZyme
Location: 163107 - 165026 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_2154_7_181	vegan > omnivore	3.27581	0.02017