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Cluster: HRGMv2_2154_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2154_39 HRGMv2_2154_39_130 134215 135366 + 3.A.1.4.10
TC HRGMv2_2154_39 HRGMv2_2154_39_131 135463 136347 + 3.A.1.4.10
TC HRGMv2_2154_39 HRGMv2_2154_39_132 136357 137409 + 3.A.1.4.8
TC HRGMv2_2154_39 HRGMv2_2154_39_133 137411 138169 + 3.A.1.4.10
TC HRGMv2_2154_39 HRGMv2_2154_39_134 138182 138892 + 3.A.1.4.10
TC HRGMv2_2154_39 HRGMv2_2154_39_135 138907 139536 + 2.A.115.2.14
CAZyme HRGMv2_2154_39 HRGMv2_2154_39_136 139619 140302 + CE4
Gene ID: HRGMv2_2154_39_130
Type: TC
Location: 134215 - 135366 (+)
Gene ID: HRGMv2_2154_39_131
Type: TC
Location: 135463 - 136347 (+)
Gene ID: HRGMv2_2154_39_132
Type: TC
Location: 136357 - 137409 (+)
Gene ID: HRGMv2_2154_39_133
Type: TC
Location: 137411 - 138169 (+)
Gene ID: HRGMv2_2154_39_134
Type: TC
Location: 138182 - 138892 (+)
Gene ID: HRGMv2_2154_39_135
Type: TC
Location: 138907 - 139536 (+)
Gene ID: HRGMv2_2154_39_136
Type: CAZyme
Location: 139619 - 140302 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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