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Cluster: HRGMv2_2154_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2154_39 HRGMv2_2154_39_2 1729 2655 + 3.A.1.1.34
TC HRGMv2_2154_39 HRGMv2_2154_39_3 2667 3536 + 3.A.1.1.11
CAZyme HRGMv2_2154_39 HRGMv2_2154_39_4 3541 4887 + GH43_4
TF HRGMv2_2154_39 HRGMv2_2154_39_5 4933 5856 + HTH_5
CAZyme HRGMv2_2154_39 HRGMv2_2154_39_6 5928 7394 + GH43_4
CAZyme HRGMv2_2154_39 HRGMv2_2154_39_7 7412 8914 + GH51_1
TC HRGMv2_2154_39 HRGMv2_2154_39_8 9226 10488 - 2.A.40.1.1
CAZyme HRGMv2_2154_39 HRGMv2_2154_39_9 10697 12856 + GH112
Gene ID: HRGMv2_2154_39_2
Type: TC
Location: 1729 - 2655 (+)
Gene ID: HRGMv2_2154_39_3
Type: TC
Location: 2667 - 3536 (+)
Gene ID: HRGMv2_2154_39_4
Type: CAZyme
Location: 3541 - 4887 (+)
Gene ID: HRGMv2_2154_39_5
Type: TF
Location: 4933 - 5856 (+)
Gene ID: HRGMv2_2154_39_6
Type: CAZyme
Location: 5928 - 7394 (+)
Gene ID: HRGMv2_2154_39_7
Type: CAZyme
Location: 7412 - 8914 (+)
Gene ID: HRGMv2_2154_39_8
Type: TC
Location: 9226 - 10488 (-)
Gene ID: HRGMv2_2154_39_9
Type: CAZyme
Location: 10697 - 12856 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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