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Cluster: HRGMv2_2154_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2154_38 HRGMv2_2154_38_38 45249 46817 - 9.A.11.1.2
TF HRGMv2_2154_38 HRGMv2_2154_38_39 46859 47551 - GntR
pfam HRGMv2_2154_38 HRGMv2_2154_38_40 47570 48433 - GHMP_kinases_N | GHMP_kinases_C
CAZyme HRGMv2_2154_38 HRGMv2_2154_38_41 48506 50062 - CBM50
pfam HRGMv2_2154_38 HRGMv2_2154_38_42 50102 50506 - PrcB_C
pfam HRGMv2_2154_38 HRGMv2_2154_38_43 50626 51366 + Acyltransferase
TC HRGMv2_2154_38 HRGMv2_2154_38_44 51403 51930 - 9.B.156.3.1
NULL(UNKNOWN) HRGMv2_2154_38 HRGMv2_2154_38_45 51987 52403 - NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_2154_38 HRGMv2_2154_38_46 52505 53812 - Aminotran_1_2
TC HRGMv2_2154_38 HRGMv2_2154_38_47 53920 54531 - 9.B.156.3.1
CAZyme HRGMv2_2154_38 HRGMv2_2154_38_48 54643 57105 - GT35
Gene ID: HRGMv2_2154_38_38
Type: TC
Location: 45249 - 46817 (-)
Gene ID: HRGMv2_2154_38_39
Type: TF
Location: 46859 - 47551 (-)
Gene ID: HRGMv2_2154_38_40
Type: pfam
Location: 47570 - 48433 (-)
Gene ID: HRGMv2_2154_38_41
Type: CAZyme
Location: 48506 - 50062 (-)
Gene ID: HRGMv2_2154_38_42
Type: pfam
Location: 50102 - 50506 (-)
Gene ID: HRGMv2_2154_38_43
Type: pfam
Location: 50626 - 51366 (+)
Gene ID: HRGMv2_2154_38_44
Type: TC
Location: 51403 - 51930 (-)
Gene ID: HRGMv2_2154_38_45
Type:
Location: 51987 - 52403 (-)
Gene ID: HRGMv2_2154_38_46
Type: STP
Location: 52505 - 53812 (-)
Gene ID: HRGMv2_2154_38_47
Type: TC
Location: 53920 - 54531 (-)
Gene ID: HRGMv2_2154_38_48
Type: CAZyme
Location: 54643 - 57105 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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