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Cluster: HRGMv2_2154_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2154_23 HRGMv2_2154_23_22 29780 31402 - GH13_31
CAZyme HRGMv2_2154_23 HRGMv2_2154_23_23 31418 33169 - CBM34 | GH13_20
CAZyme HRGMv2_2154_23 HRGMv2_2154_23_24 33180 34625 - GH77
CAZyme HRGMv2_2154_23 HRGMv2_2154_23_25 34638 36899 - GT35
CAZyme HRGMv2_2154_23 HRGMv2_2154_23_26 36902 38866 - GH133
CAZyme HRGMv2_2154_23 HRGMv2_2154_23_27 38863 40794 - GH13_14
TC HRGMv2_2154_23 HRGMv2_2154_23_28 40814 41677 - 3.A.1.1.27
TC HRGMv2_2154_23 HRGMv2_2154_23_29 41680 43026 - 3.A.1.1.27
Gene ID: HRGMv2_2154_23_22
Type: CAZyme
Location: 29780 - 31402 (-)
Gene ID: HRGMv2_2154_23_23
Type: CAZyme
Location: 31418 - 33169 (-)
Gene ID: HRGMv2_2154_23_24
Type: CAZyme
Location: 33180 - 34625 (-)
Gene ID: HRGMv2_2154_23_25
Type: CAZyme
Location: 34638 - 36899 (-)
Gene ID: HRGMv2_2154_23_26
Type: CAZyme
Location: 36902 - 38866 (-)
Gene ID: HRGMv2_2154_23_27
Type: CAZyme
Location: 38863 - 40794 (-)
Gene ID: HRGMv2_2154_23_28
Type: TC
Location: 40814 - 41677 (-)
Gene ID: HRGMv2_2154_23_29
Type: TC
Location: 41680 - 43026 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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