dbCAN Logo

Cluster: HRGMv2_2154_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2154_4 HRGMv2_2154_4_22 24802 25728 - GT2
pfam HRGMv2_2154_4 HRGMv2_2154_4_23 25791 27266 - LytR_cpsA_psr
TC HRGMv2_2154_4 HRGMv2_2154_4_24 27279 28682 - 9.B.18.1.1
CAZyme HRGMv2_2154_4 HRGMv2_2154_4_25 28775 29722 - GT2
CAZyme HRGMv2_2154_4 HRGMv2_2154_4_26 29726 31585 - GT2 | GT2
Gene ID: HRGMv2_2154_4_22
Type: CAZyme
Location: 24802 - 25728 (-)
Gene ID: HRGMv2_2154_4_23
Type: pfam
Location: 25791 - 27266 (-)
Gene ID: HRGMv2_2154_4_24
Type: TC
Location: 27279 - 28682 (-)
Gene ID: HRGMv2_2154_4_25
Type: CAZyme
Location: 28775 - 29722 (-)
Gene ID: HRGMv2_2154_4_26
Type: CAZyme
Location: 29726 - 31585 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List