Cluster: HRGMv2_2151_CGC3
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2151
- CGC Family ID: CGCFAM_00904
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2151_11 | HRGMv2_2151_11_19 | 13361 | 14419 | - | 9.B.157.1.2 |
| TC | HRGMv2_2151_11 | HRGMv2_2151_11_20 | 14524 | 15702 | - | 9.B.174.1.1 |
| pfam | HRGMv2_2151_11 | HRGMv2_2151_11_21 | 15836 | 16738 | - | FtsX | FtsX_ECD |
| TC | HRGMv2_2151_11 | HRGMv2_2151_11_22 | 16728 | 17414 | - | 3.A.1.140.1 |
| NULL(UNKNOWN) | HRGMv2_2151_11 | HRGMv2_2151_11_23 | 17558 | 17746 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | HRGMv2_2151_11 | HRGMv2_2151_11_24 | 17793 | 18884 | - | 0037176 |
| TC | HRGMv2_2151_11 | HRGMv2_2151_11_25 | 19180 | 20037 | - | 2.A.115.1.1 |
| CAZyme | HRGMv2_2151_11 | HRGMv2_2151_11_26 | 20065 | 20796 | - | GT26 |
| CAZyme | HRGMv2_2151_11 | HRGMv2_2151_11_27 | 20814 | 23045 | - | GT4 |
| pfam | HRGMv2_2151_11 | HRGMv2_2151_11_28 | 23060 | 23536 | - | DUF4330 |
| pfam | HRGMv2_2151_11 | HRGMv2_2151_11_29 | 23538 | 24035 | - | DUF4330 |
| CAZyme | HRGMv2_2151_11 | HRGMv2_2151_11_30 | 24035 | 25147 | - | GT4 |
| TC | HRGMv2_2151_11 | HRGMv2_2151_11_31 | 25129 | 28278 | - | 2.A.66.4.5 |
Gene ID: HRGMv2_2151_11_19
Type: TC
Location: 13361 - 14419 (-)
Type: TC
Location: 13361 - 14419 (-)
Gene ID: HRGMv2_2151_11_20
Type: TC
Location: 14524 - 15702 (-)
Type: TC
Location: 14524 - 15702 (-)
Gene ID: HRGMv2_2151_11_21
Type: pfam
Location: 15836 - 16738 (-)
Type: pfam
Location: 15836 - 16738 (-)
Gene ID: HRGMv2_2151_11_22
Type: TC
Location: 16728 - 17414 (-)
Type: TC
Location: 16728 - 17414 (-)
Gene ID: HRGMv2_2151_11_23
Type:
Location: 17558 - 17746 (-)
Type:
Location: 17558 - 17746 (-)
Gene ID: HRGMv2_2151_11_24
Type: TF
Location: 17793 - 18884 (-)
Type: TF
Location: 17793 - 18884 (-)
Gene ID: HRGMv2_2151_11_25
Type: TC
Location: 19180 - 20037 (-)
Type: TC
Location: 19180 - 20037 (-)
Gene ID: HRGMv2_2151_11_26
Type: CAZyme
Location: 20065 - 20796 (-)
Type: CAZyme
Location: 20065 - 20796 (-)
Gene ID: HRGMv2_2151_11_27
Type: CAZyme
Location: 20814 - 23045 (-)
Type: CAZyme
Location: 20814 - 23045 (-)
Gene ID: HRGMv2_2151_11_28
Type: pfam
Location: 23060 - 23536 (-)
Type: pfam
Location: 23060 - 23536 (-)
Gene ID: HRGMv2_2151_11_29
Type: pfam
Location: 23538 - 24035 (-)
Type: pfam
Location: 23538 - 24035 (-)
Gene ID: HRGMv2_2151_11_30
Type: CAZyme
Location: 24035 - 25147 (-)
Type: CAZyme
Location: 24035 - 25147 (-)
Gene ID: HRGMv2_2151_11_31
Type: TC
Location: 25129 - 28278 (-)
Type: TC
Location: 25129 - 28278 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Anaerotignaceae
Genus
Anaerotignum
Species
Anaerotignum sp958420075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.