Cluster: HRGMv2_2148_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2148
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2148_32 | HRGMv2_2148_32_19 | 16935 | 19472 | + | 3.A.3.2.21 |
| TC | HRGMv2_2148_32 | HRGMv2_2148_32_20 | 19602 | 20021 | + | 1.A.1.17.2 |
| pfam | HRGMv2_2148_32 | HRGMv2_2148_32_21 | 20114 | 22090 | - | FUSC_2 |
| CAZyme | HRGMv2_2148_32 | HRGMv2_2148_32_22 | 22355 | 24553 | + | CBM54 | SLH |
Gene ID: HRGMv2_2148_32_19
Type: TC
Location: 16935 - 19472 (+)
Type: TC
Location: 16935 - 19472 (+)
Gene ID: HRGMv2_2148_32_20
Type: TC
Location: 19602 - 20021 (+)
Type: TC
Location: 19602 - 20021 (+)
Gene ID: HRGMv2_2148_32_21
Type: pfam
Location: 20114 - 22090 (-)
Type: pfam
Location: 20114 - 22090 (-)
Gene ID: HRGMv2_2148_32_22
Type: CAZyme
Location: 22355 - 24553 (+)
Type: CAZyme
Location: 22355 - 24553 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Anaerotignaceae
Genus
Anaerotignum
Species
Anaerotignum lactatifermentans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.