Cluster: HRGMv2_2148_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2148
- CGC Family ID: CGCFAM_04040
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2148_26 | HRGMv2_2148_26_21 | 23870 | 24541 | + | 9.B.143.2.3 |
| TC | HRGMv2_2148_26 | HRGMv2_2148_26_22 | 24833 | 28300 | - | 3.B.1.1.1 |
| STP | HRGMv2_2148_26 | HRGMv2_2148_26_23 | 28440 | 29828 | - | AAA |
| NULL(UNKNOWN) | HRGMv2_2148_26 | HRGMv2_2148_26_24 | 29953 | 30366 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2148_26 | HRGMv2_2148_26_25 | 30518 | 32971 | - | 3.A.9.1.2 |
| pfam | HRGMv2_2148_26 | HRGMv2_2148_26_26 | 33117 | 33794 | - | PseudoU_synth_2 |
| CAZyme | HRGMv2_2148_26 | HRGMv2_2148_26_27 | 33798 | 35906 | - | GH13_39 |
Gene ID: HRGMv2_2148_26_21
Type: TC
Location: 23870 - 24541 (+)
Type: TC
Location: 23870 - 24541 (+)
Gene ID: HRGMv2_2148_26_22
Type: TC
Location: 24833 - 28300 (-)
Type: TC
Location: 24833 - 28300 (-)
Gene ID: HRGMv2_2148_26_23
Type: STP
Location: 28440 - 29828 (-)
Type: STP
Location: 28440 - 29828 (-)
Gene ID: HRGMv2_2148_26_24
Type:
Location: 29953 - 30366 (-)
Type:
Location: 29953 - 30366 (-)
Gene ID: HRGMv2_2148_26_25
Type: TC
Location: 30518 - 32971 (-)
Type: TC
Location: 30518 - 32971 (-)
Gene ID: HRGMv2_2148_26_26
Type: pfam
Location: 33117 - 33794 (-)
Type: pfam
Location: 33117 - 33794 (-)
Gene ID: HRGMv2_2148_26_27
Type: CAZyme
Location: 33798 - 35906 (-)
Type: CAZyme
Location: 33798 - 35906 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Anaerotignaceae
Genus
Anaerotignum
Species
Anaerotignum lactatifermentans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.