Cluster: HRGMv2_2148_CGC2
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2148
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2148_1 | HRGMv2_2148_1_124 | 124926 | 125984 | - | 9.B.157.1.2 |
| TC | HRGMv2_2148_1 | HRGMv2_2148_1_125 | 126089 | 127267 | - | 9.B.174.1.1 |
| pfam | HRGMv2_2148_1 | HRGMv2_2148_1_126 | 127401 | 128303 | - | FtsX | FtsX_ECD |
| TC | HRGMv2_2148_1 | HRGMv2_2148_1_127 | 128293 | 128979 | - | 3.A.1.140.1 |
| TF | HRGMv2_2148_1 | HRGMv2_2148_1_128 | 129355 | 130446 | - | 0037176 |
| TC | HRGMv2_2148_1 | HRGMv2_2148_1_129 | 130742 | 131599 | - | 2.A.115.1.1 |
| CAZyme | HRGMv2_2148_1 | HRGMv2_2148_1_130 | 131627 | 132358 | - | GT26 |
| CAZyme | HRGMv2_2148_1 | HRGMv2_2148_1_131 | 132376 | 134607 | - | GT4 |
| pfam | HRGMv2_2148_1 | HRGMv2_2148_1_132 | 134622 | 135098 | - | DUF4330 |
| pfam | HRGMv2_2148_1 | HRGMv2_2148_1_133 | 135100 | 135597 | - | DUF4330 |
| CAZyme | HRGMv2_2148_1 | HRGMv2_2148_1_134 | 135597 | 136709 | - | GT4 |
| TC | HRGMv2_2148_1 | HRGMv2_2148_1_135 | 136691 | 139840 | - | 2.A.66.4.5 |
Gene ID: HRGMv2_2148_1_124
Type: TC
Location: 124926 - 125984 (-)
Type: TC
Location: 124926 - 125984 (-)
Gene ID: HRGMv2_2148_1_125
Type: TC
Location: 126089 - 127267 (-)
Type: TC
Location: 126089 - 127267 (-)
Gene ID: HRGMv2_2148_1_126
Type: pfam
Location: 127401 - 128303 (-)
Type: pfam
Location: 127401 - 128303 (-)
Gene ID: HRGMv2_2148_1_127
Type: TC
Location: 128293 - 128979 (-)
Type: TC
Location: 128293 - 128979 (-)
Gene ID: HRGMv2_2148_1_128
Type: TF
Location: 129355 - 130446 (-)
Type: TF
Location: 129355 - 130446 (-)
Gene ID: HRGMv2_2148_1_129
Type: TC
Location: 130742 - 131599 (-)
Type: TC
Location: 130742 - 131599 (-)
Gene ID: HRGMv2_2148_1_130
Type: CAZyme
Location: 131627 - 132358 (-)
Type: CAZyme
Location: 131627 - 132358 (-)
Gene ID: HRGMv2_2148_1_131
Type: CAZyme
Location: 132376 - 134607 (-)
Type: CAZyme
Location: 132376 - 134607 (-)
Gene ID: HRGMv2_2148_1_132
Type: pfam
Location: 134622 - 135098 (-)
Type: pfam
Location: 134622 - 135098 (-)
Gene ID: HRGMv2_2148_1_133
Type: pfam
Location: 135100 - 135597 (-)
Type: pfam
Location: 135100 - 135597 (-)
Gene ID: HRGMv2_2148_1_134
Type: CAZyme
Location: 135597 - 136709 (-)
Type: CAZyme
Location: 135597 - 136709 (-)
Gene ID: HRGMv2_2148_1_135
Type: TC
Location: 136691 - 139840 (-)
Type: TC
Location: 136691 - 139840 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Anaerotignaceae
Genus
Anaerotignum
Species
Anaerotignum lactatifermentans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.