Cluster: HRGMv2_2148_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2148
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2148_1 | HRGMv2_2148_1_10 | 13572 | 14453 | - | 3.A.1.132.7 |
| TC | HRGMv2_2148_1 | HRGMv2_2148_1_11 | 14450 | 15376 | - | 3.A.1.144.2 |
| NULL(UNKNOWN) | HRGMv2_2148_1 | HRGMv2_2148_1_12 | 15369 | 17888 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2148_1 | HRGMv2_2148_1_13 | 17971 | 19845 | - | UvrD-helicase | ResIII | AAA_19 | UvrD_C | UvrD_C_2 |
| CAZyme | HRGMv2_2148_1 | HRGMv2_2148_1_14 | 20021 | 21337 | + | GT4 |
| TC | HRGMv2_2148_1 | HRGMv2_2148_1_15 | 21680 | 23050 | - | 2.A.25.1.3 |
| TC | HRGMv2_2148_1 | HRGMv2_2148_1_16 | 23665 | 25035 | - | 2.A.25.1.3 |
Gene ID: HRGMv2_2148_1_10
Type: TC
Location: 13572 - 14453 (-)
Type: TC
Location: 13572 - 14453 (-)
Gene ID: HRGMv2_2148_1_11
Type: TC
Location: 14450 - 15376 (-)
Type: TC
Location: 14450 - 15376 (-)
Gene ID: HRGMv2_2148_1_12
Type:
Location: 15369 - 17888 (-)
Type:
Location: 15369 - 17888 (-)
Gene ID: HRGMv2_2148_1_13
Type: pfam
Location: 17971 - 19845 (-)
Type: pfam
Location: 17971 - 19845 (-)
Gene ID: HRGMv2_2148_1_14
Type: CAZyme
Location: 20021 - 21337 (+)
Type: CAZyme
Location: 20021 - 21337 (+)
Gene ID: HRGMv2_2148_1_15
Type: TC
Location: 21680 - 23050 (-)
Type: TC
Location: 21680 - 23050 (-)
Gene ID: HRGMv2_2148_1_16
Type: TC
Location: 23665 - 25035 (-)
Type: TC
Location: 23665 - 25035 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Anaerotignaceae
Genus
Anaerotignum
Species
Anaerotignum lactatifermentans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.