Cluster: HRGMv2_2147_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2147
- CGC Family ID: CGCFAM_04041
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2147_14 | HRGMv2_2147_14_10 | 13579 | 14460 | - | 3.A.1.132.7 |
| TC | HRGMv2_2147_14 | HRGMv2_2147_14_11 | 14457 | 15383 | - | 3.A.1.144.2 |
| NULL(UNKNOWN) | HRGMv2_2147_14 | HRGMv2_2147_14_12 | 15376 | 17883 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2147_14 | HRGMv2_2147_14_13 | 17967 | 19841 | - | UvrD-helicase | ResIII | AAA_19 | UvrD_C | UvrD_C_2 |
| CAZyme | HRGMv2_2147_14 | HRGMv2_2147_14_14 | 20015 | 21331 | + | GT4 |
| TC | HRGMv2_2147_14 | HRGMv2_2147_14_15 | 21673 | 23043 | - | 2.A.25.1.3 |
| TC | HRGMv2_2147_14 | HRGMv2_2147_14_16 | 23656 | 25026 | - | 2.A.25.1.3 |
Gene ID: HRGMv2_2147_14_10
Type: TC
Location: 13579 - 14460 (-)
Type: TC
Location: 13579 - 14460 (-)
Gene ID: HRGMv2_2147_14_11
Type: TC
Location: 14457 - 15383 (-)
Type: TC
Location: 14457 - 15383 (-)
Gene ID: HRGMv2_2147_14_12
Type:
Location: 15376 - 17883 (-)
Type:
Location: 15376 - 17883 (-)
Gene ID: HRGMv2_2147_14_13
Type: pfam
Location: 17967 - 19841 (-)
Type: pfam
Location: 17967 - 19841 (-)
Gene ID: HRGMv2_2147_14_14
Type: CAZyme
Location: 20015 - 21331 (+)
Type: CAZyme
Location: 20015 - 21331 (+)
Gene ID: HRGMv2_2147_14_15
Type: TC
Location: 21673 - 23043 (-)
Type: TC
Location: 21673 - 23043 (-)
Gene ID: HRGMv2_2147_14_16
Type: TC
Location: 23656 - 25026 (-)
Type: TC
Location: 23656 - 25026 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Anaerotignaceae
Genus
Anaerotignum
Species
Anaerotignum sp001304995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.