Cluster: HRGMv2_2147_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2147
- CGC Family ID: CGCFAM_04040
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2147_5 | HRGMv2_2147_5_116 | 118200 | 120308 | + | GH13_39 |
| pfam | HRGMv2_2147_5 | HRGMv2_2147_5_117 | 120312 | 120989 | + | PseudoU_synth_2 |
| TC | HRGMv2_2147_5 | HRGMv2_2147_5_118 | 121135 | 123588 | + | 3.A.9.1.2 |
| NULL(UNKNOWN) | HRGMv2_2147_5 | HRGMv2_2147_5_119 | 123740 | 124153 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | HRGMv2_2147_5 | HRGMv2_2147_5_120 | 124278 | 125666 | + | S16.UNW |
| TC | HRGMv2_2147_5 | HRGMv2_2147_5_121 | 125806 | 129273 | + | 3.B.1.1.1 |
| TC | HRGMv2_2147_5 | HRGMv2_2147_5_122 | 129388 | 130059 | - | 9.B.143.2.3 |
Gene ID: HRGMv2_2147_5_116
Type: CAZyme
Location: 118200 - 120308 (+)
Type: CAZyme
Location: 118200 - 120308 (+)
Gene ID: HRGMv2_2147_5_117
Type: pfam
Location: 120312 - 120989 (+)
Type: pfam
Location: 120312 - 120989 (+)
Gene ID: HRGMv2_2147_5_118
Type: TC
Location: 121135 - 123588 (+)
Type: TC
Location: 121135 - 123588 (+)
Gene ID: HRGMv2_2147_5_119
Type:
Location: 123740 - 124153 (+)
Type:
Location: 123740 - 124153 (+)
Gene ID: HRGMv2_2147_5_120
Type: peptidase
Location: 124278 - 125666 (+)
Type: peptidase
Location: 124278 - 125666 (+)
Gene ID: HRGMv2_2147_5_121
Type: TC
Location: 125806 - 129273 (+)
Type: TC
Location: 125806 - 129273 (+)
Gene ID: HRGMv2_2147_5_122
Type: TC
Location: 129388 - 130059 (-)
Type: TC
Location: 129388 - 130059 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Anaerotignaceae
Genus
Anaerotignum
Species
Anaerotignum sp001304995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.