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Cluster: HRGMv2_2147_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2147_4 HRGMv2_2147_4_188 187965 191114 + 2.A.66.4.5
CAZyme HRGMv2_2147_4 HRGMv2_2147_4_189 191096 192208 + GT4
pfam HRGMv2_2147_4 HRGMv2_2147_4_190 192208 192705 + DUF4330
pfam HRGMv2_2147_4 HRGMv2_2147_4_191 192707 193183 + DUF4330
CAZyme HRGMv2_2147_4 HRGMv2_2147_4_192 193198 195429 + GT4
CAZyme HRGMv2_2147_4 HRGMv2_2147_4_193 195447 196178 + GT26
TC HRGMv2_2147_4 HRGMv2_2147_4_194 196206 197063 + 2.A.115.1.1
TF HRGMv2_2147_4 HRGMv2_2147_4_195 197360 198451 + 0037176
TC HRGMv2_2147_4 HRGMv2_2147_4_196 198939 199625 + 3.A.1.140.1
pfam HRGMv2_2147_4 HRGMv2_2147_4_197 199615 200517 + FtsX | FtsX_ECD
TC HRGMv2_2147_4 HRGMv2_2147_4_198 200650 201828 + 9.B.174.1.1
TC HRGMv2_2147_4 HRGMv2_2147_4_199 201933 202991 + 9.B.157.1.2
Gene ID: HRGMv2_2147_4_188
Type: TC
Location: 187965 - 191114 (+)
Gene ID: HRGMv2_2147_4_189
Type: CAZyme
Location: 191096 - 192208 (+)
Gene ID: HRGMv2_2147_4_190
Type: pfam
Location: 192208 - 192705 (+)
Gene ID: HRGMv2_2147_4_191
Type: pfam
Location: 192707 - 193183 (+)
Gene ID: HRGMv2_2147_4_192
Type: CAZyme
Location: 193198 - 195429 (+)
Gene ID: HRGMv2_2147_4_193
Type: CAZyme
Location: 195447 - 196178 (+)
Gene ID: HRGMv2_2147_4_194
Type: TC
Location: 196206 - 197063 (+)
Gene ID: HRGMv2_2147_4_195
Type: TF
Location: 197360 - 198451 (+)
Gene ID: HRGMv2_2147_4_196
Type: TC
Location: 198939 - 199625 (+)
Gene ID: HRGMv2_2147_4_197
Type: pfam
Location: 199615 - 200517 (+)
Gene ID: HRGMv2_2147_4_198
Type: TC
Location: 200650 - 201828 (+)
Gene ID: HRGMv2_2147_4_199
Type: TC
Location: 201933 - 202991 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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