Cluster: HRGMv2_2132_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2132
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2132_6 | HRGMv2_2132_6_35 | 37230 | 38153 | - | 8.A.21.2.2 |
| pfam | HRGMv2_2132_6 | HRGMv2_2132_6_36 | 38319 | 39476 | - | Hydrolase_2 | SH3_3 | SH3_3 |
| NULL(UNKNOWN) | HRGMv2_2132_6 | HRGMv2_2132_6_37 | 39624 | 39968 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2132_6 | HRGMv2_2132_6_38 | 40119 | 41186 | + | GT28 |
Gene ID: HRGMv2_2132_6_35
Type: TC
Location: 37230 - 38153 (-)
Type: TC
Location: 37230 - 38153 (-)
Gene ID: HRGMv2_2132_6_36
Type: pfam
Location: 38319 - 39476 (-)
Type: pfam
Location: 38319 - 39476 (-)
Gene ID: HRGMv2_2132_6_37
Type:
Location: 39624 - 39968 (-)
Type:
Location: 39624 - 39968 (-)
Gene ID: HRGMv2_2132_6_38
Type: CAZyme
Location: 40119 - 41186 (+)
Type: CAZyme
Location: 40119 - 41186 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pararoseburia
Species
Pararoseburia sp900546435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.