Cluster: HRGMv2_2132_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2132
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2132_6 | HRGMv2_2132_6_23 | 23817 | 25301 | - | GH77 |
| TC | HRGMv2_2132_6 | HRGMv2_2132_6_24 | 25337 | 26179 | - | 3.A.1.1.45 |
| TC | HRGMv2_2132_6 | HRGMv2_2132_6_25 | 26179 | 27030 | - | 3.A.1.1.45 |
| TC | HRGMv2_2132_6 | HRGMv2_2132_6_26 | 27133 | 28437 | - | 3.A.1.1.45 |
| TF | HRGMv2_2132_6 | HRGMv2_2132_6_27 | 28553 | 29566 | - | LacI |
| TF | HRGMv2_2132_6 | HRGMv2_2132_6_28 | 29743 | 30630 | - | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_2132_6 | HRGMv2_2132_6_29 | 30776 | 33031 | + | GT35 |
Gene ID: HRGMv2_2132_6_23
Type: CAZyme
Location: 23817 - 25301 (-)
Type: CAZyme
Location: 23817 - 25301 (-)
Gene ID: HRGMv2_2132_6_24
Type: TC
Location: 25337 - 26179 (-)
Type: TC
Location: 25337 - 26179 (-)
Gene ID: HRGMv2_2132_6_25
Type: TC
Location: 26179 - 27030 (-)
Type: TC
Location: 26179 - 27030 (-)
Gene ID: HRGMv2_2132_6_26
Type: TC
Location: 27133 - 28437 (-)
Type: TC
Location: 27133 - 28437 (-)
Gene ID: HRGMv2_2132_6_27
Type: TF
Location: 28553 - 29566 (-)
Type: TF
Location: 28553 - 29566 (-)
Gene ID: HRGMv2_2132_6_28
Type: TF
Location: 29743 - 30630 (-)
Type: TF
Location: 29743 - 30630 (-)
Gene ID: HRGMv2_2132_6_29
Type: CAZyme
Location: 30776 - 33031 (+)
Type: CAZyme
Location: 30776 - 33031 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pararoseburia
Species
Pararoseburia sp900546435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.