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Cluster: HRGMv2_2132_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2132_4 HRGMv2_2132_4_110 109048 110538 - GT4
TC HRGMv2_2132_4 HRGMv2_2132_4_111 110561 112792 - 3.A.5.10.1
pfam HRGMv2_2132_4 HRGMv2_2132_4_112 112809 113345 - Sec-ASP3
TC HRGMv2_2132_4 HRGMv2_2132_4_113 113358 114866 - 3.A.5.10.1
pfam HRGMv2_2132_4 HRGMv2_2132_4_114 114859 116430 - Asp1
TC HRGMv2_2132_4 HRGMv2_2132_4_115 116457 117653 - 3.A.5.4.1
NULL(UNKNOWN) HRGMv2_2132_4 HRGMv2_2132_4_116 117749 120652 - NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_2132_4 HRGMv2_2132_4_117 120765 121985 - BTAD
TC HRGMv2_2132_4 HRGMv2_2132_4_118 122005 123063 - 3.A.15.2.1
Gene ID: HRGMv2_2132_4_110
Type: CAZyme
Location: 109048 - 110538 (-)
Gene ID: HRGMv2_2132_4_111
Type: TC
Location: 110561 - 112792 (-)
Gene ID: HRGMv2_2132_4_112
Type: pfam
Location: 112809 - 113345 (-)
Gene ID: HRGMv2_2132_4_113
Type: TC
Location: 113358 - 114866 (-)
Gene ID: HRGMv2_2132_4_114
Type: pfam
Location: 114859 - 116430 (-)
Gene ID: HRGMv2_2132_4_115
Type: TC
Location: 116457 - 117653 (-)
Gene ID: HRGMv2_2132_4_116
Type:
Location: 117749 - 120652 (-)
Gene ID: HRGMv2_2132_4_117
Type: STP
Location: 120765 - 121985 (-)
Gene ID: HRGMv2_2132_4_118
Type: TC
Location: 122005 - 123063 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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