Cluster: HRGMv2_2132_CGC35
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2132
- CGC Family ID: CGCFAM_00841
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2132_33 | HRGMv2_2132_33_108 | 98744 | 99847 | - | 9.B.34.1.3 |
| pfam | HRGMv2_2132_33 | HRGMv2_2132_33_109 | 99920 | 100849 | - | DAGK_cat | YegS_C |
| TC | HRGMv2_2132_33 | HRGMv2_2132_33_110 | 100985 | 102265 | + | 2.A.49.9.2 |
| CAZyme | HRGMv2_2132_33 | HRGMv2_2132_33_111 | 102308 | 104641 | - | GH36 |
| TC | HRGMv2_2132_33 | HRGMv2_2132_33_112 | 104709 | 106112 | - | 2.A.2.1.1 |
| pfam | HRGMv2_2132_33 | HRGMv2_2132_33_113 | 106140 | 107609 | - | DUF6937 | DUF6938 |
| CAZyme | HRGMv2_2132_33 | HRGMv2_2132_33_114 | 107611 | 110055 | - | GH2 |
Gene ID: HRGMv2_2132_33_108
Type: TC
Location: 98744 - 99847 (-)
Type: TC
Location: 98744 - 99847 (-)
Gene ID: HRGMv2_2132_33_109
Type: pfam
Location: 99920 - 100849 (-)
Type: pfam
Location: 99920 - 100849 (-)
Gene ID: HRGMv2_2132_33_110
Type: TC
Location: 100985 - 102265 (+)
Type: TC
Location: 100985 - 102265 (+)
Gene ID: HRGMv2_2132_33_111
Type: CAZyme
Location: 102308 - 104641 (-)
Type: CAZyme
Location: 102308 - 104641 (-)
Gene ID: HRGMv2_2132_33_112
Type: TC
Location: 104709 - 106112 (-)
Type: TC
Location: 104709 - 106112 (-)
Gene ID: HRGMv2_2132_33_113
Type: pfam
Location: 106140 - 107609 (-)
Type: pfam
Location: 106140 - 107609 (-)
Gene ID: HRGMv2_2132_33_114
Type: CAZyme
Location: 107611 - 110055 (-)
Type: CAZyme
Location: 107611 - 110055 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pararoseburia
Species
Pararoseburia sp900546435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.