Cluster: HRGMv2_2132_CGC31
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2132
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2132_25 | HRGMv2_2132_25_117 | 108989 | 110515 | - | 1.B.52.2.2 |
| TC | HRGMv2_2132_25 | HRGMv2_2132_25_118 | 110721 | 112112 | - | 2.A.2.3.5 |
| CAZyme | HRGMv2_2132_25 | HRGMv2_2132_25_119 | 112142 | 114406 | - | GH2 |
Gene ID: HRGMv2_2132_25_117
Type: TC
Location: 108989 - 110515 (-)
Type: TC
Location: 108989 - 110515 (-)
Gene ID: HRGMv2_2132_25_118
Type: TC
Location: 110721 - 112112 (-)
Type: TC
Location: 110721 - 112112 (-)
Gene ID: HRGMv2_2132_25_119
Type: CAZyme
Location: 112142 - 114406 (-)
Type: CAZyme
Location: 112142 - 114406 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pararoseburia
Species
Pararoseburia sp900546435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2132_25_118 | vegetarian > vegan | 1.58379 | 0.04425 |
| HRGMv2_2132_25_119 | vegetarian > vegan | 1.33805 | 0.04425 |