Cluster: HRGMv2_2132_CGC30
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2132
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2132_25 | HRGMv2_2132_25_78 | 64263 | 66101 | - | 1.B.52.2.1 |
| CAZyme | HRGMv2_2132_25 | HRGMv2_2132_25_79 | 66219 | 69263 | - | GH3 |
| pfam | HRGMv2_2132_25 | HRGMv2_2132_25_80 | 69401 | 70711 | - | HATPase_c_5 |
| TF | HRGMv2_2132_25 | HRGMv2_2132_25_81 | 70721 | 71437 | - | LytTR |
| TC | HRGMv2_2132_25 | HRGMv2_2132_25_82 | 71459 | 72832 | - | 2.A.66.1.32 |
| TC | HRGMv2_2132_25 | HRGMv2_2132_25_83 | 72961 | 73518 | - | 3.A.1.25.5 |
Gene ID: HRGMv2_2132_25_78
Type: TC
Location: 64263 - 66101 (-)
Type: TC
Location: 64263 - 66101 (-)
Gene ID: HRGMv2_2132_25_79
Type: CAZyme
Location: 66219 - 69263 (-)
Type: CAZyme
Location: 66219 - 69263 (-)
Gene ID: HRGMv2_2132_25_80
Type: pfam
Location: 69401 - 70711 (-)
Type: pfam
Location: 69401 - 70711 (-)
Gene ID: HRGMv2_2132_25_81
Type: TF
Location: 70721 - 71437 (-)
Type: TF
Location: 70721 - 71437 (-)
Gene ID: HRGMv2_2132_25_82
Type: TC
Location: 71459 - 72832 (-)
Type: TC
Location: 71459 - 72832 (-)
Gene ID: HRGMv2_2132_25_83
Type: TC
Location: 72961 - 73518 (-)
Type: TC
Location: 72961 - 73518 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pararoseburia
Species
Pararoseburia sp900546435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.