Cluster: HRGMv2_2132_CGC29
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2132
- CGC Family ID: CGCFAM_09971
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2132_25 | HRGMv2_2132_25_6 | 7890 | 8933 | - | GT2 |
| STP | HRGMv2_2132_25 | HRGMv2_2132_25_7 | 8994 | 10187 | - | Aminotran_1_2 |
| TC | HRGMv2_2132_25 | HRGMv2_2132_25_8 | 10266 | 12887 | - | 3.A.3.5.15 |
| pfam | HRGMv2_2132_25 | HRGMv2_2132_25_9 | 12899 | 13219 | - | Trns_repr_metal |
| STP | HRGMv2_2132_25 | HRGMv2_2132_25_10 | 13375 | 14394 | - | PfkB |
| TC | HRGMv2_2132_25 | HRGMv2_2132_25_11 | 14426 | 15778 | - | 2.A.66.1.33 |
Gene ID: HRGMv2_2132_25_6
Type: CAZyme
Location: 7890 - 8933 (-)
Type: CAZyme
Location: 7890 - 8933 (-)
Gene ID: HRGMv2_2132_25_7
Type: STP
Location: 8994 - 10187 (-)
Type: STP
Location: 8994 - 10187 (-)
Gene ID: HRGMv2_2132_25_8
Type: TC
Location: 10266 - 12887 (-)
Type: TC
Location: 10266 - 12887 (-)
Gene ID: HRGMv2_2132_25_9
Type: pfam
Location: 12899 - 13219 (-)
Type: pfam
Location: 12899 - 13219 (-)
Gene ID: HRGMv2_2132_25_10
Type: STP
Location: 13375 - 14394 (-)
Type: STP
Location: 13375 - 14394 (-)
Gene ID: HRGMv2_2132_25_11
Type: TC
Location: 14426 - 15778 (-)
Type: TC
Location: 14426 - 15778 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pararoseburia
Species
Pararoseburia sp900546435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.