Cluster: HRGMv2_2132_CGC28
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2132
- CGC Family ID: CGCFAM_09970
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2132_22 | HRGMv2_2132_22_48 | 46051 | 47736 | + | 1.B.52.2.1 |
| pfam | HRGMv2_2132_22 | HRGMv2_2132_22_49 | 47798 | 48418 | + | Zn_dep_PLPC |
| CAZyme | HRGMv2_2132_22 | HRGMv2_2132_22_50 | 48580 | 50634 | + | GH31_15 |
| TC | HRGMv2_2132_22 | HRGMv2_2132_22_51 | 50845 | 51570 | + | 3.A.1.114.1 |
Gene ID: HRGMv2_2132_22_48
Type: TC
Location: 46051 - 47736 (+)
Type: TC
Location: 46051 - 47736 (+)
Gene ID: HRGMv2_2132_22_49
Type: pfam
Location: 47798 - 48418 (+)
Type: pfam
Location: 47798 - 48418 (+)
Gene ID: HRGMv2_2132_22_50
Type: CAZyme
Location: 48580 - 50634 (+)
Type: CAZyme
Location: 48580 - 50634 (+)
Gene ID: HRGMv2_2132_22_51
Type: TC
Location: 50845 - 51570 (+)
Type: TC
Location: 50845 - 51570 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pararoseburia
Species
Pararoseburia sp900546435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.