Cluster: HRGMv2_2132_CGC25
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2132
- CGC Family ID: CGCFAM_00596
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2132_16 | HRGMv2_2132_16_3 | 2400 | 4298 | - | CBM48 | GH13_9 |
| NULL(UNKNOWN) | HRGMv2_2132_16 | HRGMv2_2132_16_4 | 4326 | 7034 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2132_16 | HRGMv2_2132_16_5 | 7230 | 8579 | - | 2.A.86.1.8 |
| pfam | HRGMv2_2132_16 | HRGMv2_2132_16_6 | 8585 | 10870 | - | Aconitase | Aconitase_C |
| NULL(UNKNOWN) | HRGMv2_2132_16 | HRGMv2_2132_16_7 | 10889 | 11671 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2132_16 | HRGMv2_2132_16_8 | 11816 | 12745 | - | 2.A.19.5.1 |
Gene ID: HRGMv2_2132_16_3
Type: CAZyme
Location: 2400 - 4298 (-)
Type: CAZyme
Location: 2400 - 4298 (-)
Gene ID: HRGMv2_2132_16_4
Type:
Location: 4326 - 7034 (-)
Type:
Location: 4326 - 7034 (-)
Gene ID: HRGMv2_2132_16_5
Type: TC
Location: 7230 - 8579 (-)
Type: TC
Location: 7230 - 8579 (-)
Gene ID: HRGMv2_2132_16_6
Type: pfam
Location: 8585 - 10870 (-)
Type: pfam
Location: 8585 - 10870 (-)
Gene ID: HRGMv2_2132_16_7
Type:
Location: 10889 - 11671 (-)
Type:
Location: 10889 - 11671 (-)
Gene ID: HRGMv2_2132_16_8
Type: TC
Location: 11816 - 12745 (-)
Type: TC
Location: 11816 - 12745 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pararoseburia
Species
Pararoseburia sp900546435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.