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Cluster: HRGMv2_2132_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2132_15 HRGMv2_2132_15_101 117680 118468 + CE4
STP HRGMv2_2132_15 HRGMv2_2132_15_102 118472 119098 - TetR_N
TC HRGMv2_2132_15 HRGMv2_2132_15_103 119109 120470 - 2.A.66.1.26
STP HRGMv2_2132_15 HRGMv2_2132_15_104 120774 120992 + FeoA
TC HRGMv2_2132_15 HRGMv2_2132_15_105 121052 121279 + 9.A.8.1.6
TC HRGMv2_2132_15 HRGMv2_2132_15_106 121284 123431 + 9.A.8.1.6
pfam HRGMv2_2132_15 HRGMv2_2132_15_107 123473 123634 + FeoB_associated
CAZyme HRGMv2_2132_15 HRGMv2_2132_15_108 123748 124920 + GT2
NULL(UNKNOWN) HRGMv2_2132_15 HRGMv2_2132_15_109 124999 125244 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2132_15 HRGMv2_2132_15_110 125443 125589 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2132_15 HRGMv2_2132_15_111 125783 126598 + GT111
Gene ID: HRGMv2_2132_15_101
Type: CAZyme
Location: 117680 - 118468 (+)
Gene ID: HRGMv2_2132_15_102
Type: STP
Location: 118472 - 119098 (-)
Gene ID: HRGMv2_2132_15_103
Type: TC
Location: 119109 - 120470 (-)
Gene ID: HRGMv2_2132_15_104
Type: STP
Location: 120774 - 120992 (+)
Gene ID: HRGMv2_2132_15_105
Type: TC
Location: 121052 - 121279 (+)
Gene ID: HRGMv2_2132_15_106
Type: TC
Location: 121284 - 123431 (+)
Gene ID: HRGMv2_2132_15_107
Type: pfam
Location: 123473 - 123634 (+)
Gene ID: HRGMv2_2132_15_108
Type: CAZyme
Location: 123748 - 124920 (+)
Gene ID: HRGMv2_2132_15_109
Type:
Location: 124999 - 125244 (-)
Gene ID: HRGMv2_2132_15_110
Type:
Location: 125443 - 125589 (+)
Gene ID: HRGMv2_2132_15_111
Type: CAZyme
Location: 125783 - 126598 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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