Cluster: HRGMv2_2132_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2132
- CGC Family ID: CGCFAM_01420
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2132_15 | HRGMv2_2132_15_77 | 89367 | 90200 | + | 3.A.1.104.1 |
| TC | HRGMv2_2132_15 | HRGMv2_2132_15_78 | 90227 | 91537 | + | 3.A.1.103.6 |
| pfam | HRGMv2_2132_15 | HRGMv2_2132_15_79 | 91646 | 92524 | + | NTP_transferase | NTP_transf_3 |
| pfam | HRGMv2_2132_15 | HRGMv2_2132_15_80 | 92564 | 93394 | + | Hexapep | Hexapep | Hexapep_2 | Hexapep_2 |
| CAZyme | HRGMv2_2132_15 | HRGMv2_2132_15_81 | 93468 | 94406 | + | GT2 |
Gene ID: HRGMv2_2132_15_77
Type: TC
Location: 89367 - 90200 (+)
Type: TC
Location: 89367 - 90200 (+)
Gene ID: HRGMv2_2132_15_78
Type: TC
Location: 90227 - 91537 (+)
Type: TC
Location: 90227 - 91537 (+)
Gene ID: HRGMv2_2132_15_79
Type: pfam
Location: 91646 - 92524 (+)
Type: pfam
Location: 91646 - 92524 (+)
Gene ID: HRGMv2_2132_15_80
Type: pfam
Location: 92564 - 93394 (+)
Type: pfam
Location: 92564 - 93394 (+)
Gene ID: HRGMv2_2132_15_81
Type: CAZyme
Location: 93468 - 94406 (+)
Type: CAZyme
Location: 93468 - 94406 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pararoseburia
Species
Pararoseburia sp900546435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2132_15_79 | vegetarian > vegan | 1.07876 | 0.04425 |