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Cluster: HRGMv2_2132_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2132_15 HRGMv2_2132_15_23 22812 23648 + GT2
CAZyme HRGMv2_2132_15 HRGMv2_2132_15_24 23651 24343 + GT2
pfam HRGMv2_2132_15 HRGMv2_2132_15_25 24353 24724 + DUF2304
pfam HRGMv2_2132_15 HRGMv2_2132_15_26 24811 25896 + 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
CAZyme HRGMv2_2132_15 HRGMv2_2132_15_27 25889 26875 + GT2
CAZyme HRGMv2_2132_15 HRGMv2_2132_15_28 26901 27857 + GT2
CAZyme HRGMv2_2132_15 HRGMv2_2132_15_29 27871 29817 + GT2
TC HRGMv2_2132_15 HRGMv2_2132_15_30 29878 31323 + 9.B.18.1.3
CAZyme HRGMv2_2132_15 HRGMv2_2132_15_31 31356 32171 + GT2
CAZyme HRGMv2_2132_15 HRGMv2_2132_15_32 32199 33203 + GT2
CAZyme HRGMv2_2132_15 HRGMv2_2132_15_33 33301 34341 + GT2
TC HRGMv2_2132_15 HRGMv2_2132_15_34 34345 35121 + 3.A.1.103.4
TC HRGMv2_2132_15 HRGMv2_2132_15_35 35134 35871 + 3.A.1.103.1
pfam HRGMv2_2132_15 HRGMv2_2132_15_36 35837 36454 + Glft2_N
CAZyme HRGMv2_2132_15 HRGMv2_2132_15_37 36549 37676 + GT2
Gene ID: HRGMv2_2132_15_23
Type: CAZyme
Location: 22812 - 23648 (+)
Gene ID: HRGMv2_2132_15_24
Type: CAZyme
Location: 23651 - 24343 (+)
Gene ID: HRGMv2_2132_15_25
Type: pfam
Location: 24353 - 24724 (+)
Gene ID: HRGMv2_2132_15_26
Type: pfam
Location: 24811 - 25896 (+)
Gene ID: HRGMv2_2132_15_27
Type: CAZyme
Location: 25889 - 26875 (+)
Gene ID: HRGMv2_2132_15_28
Type: CAZyme
Location: 26901 - 27857 (+)
Gene ID: HRGMv2_2132_15_29
Type: CAZyme
Location: 27871 - 29817 (+)
Gene ID: HRGMv2_2132_15_30
Type: TC
Location: 29878 - 31323 (+)
Gene ID: HRGMv2_2132_15_31
Type: CAZyme
Location: 31356 - 32171 (+)
Gene ID: HRGMv2_2132_15_32
Type: CAZyme
Location: 32199 - 33203 (+)
Gene ID: HRGMv2_2132_15_33
Type: CAZyme
Location: 33301 - 34341 (+)
Gene ID: HRGMv2_2132_15_34
Type: TC
Location: 34345 - 35121 (+)
Gene ID: HRGMv2_2132_15_35
Type: TC
Location: 35134 - 35871 (+)
Gene ID: HRGMv2_2132_15_36
Type: pfam
Location: 35837 - 36454 (+)
Gene ID: HRGMv2_2132_15_37
Type: CAZyme
Location: 36549 - 37676 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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