dbCAN Logo

Cluster: HRGMv2_2132_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2132_2 HRGMv2_2132_2_9 6907 7548 - 9.B.28.1.2
TC HRGMv2_2132_2 HRGMv2_2132_2_10 7554 8426 - 3.A.1.1.48
TC HRGMv2_2132_2 HRGMv2_2132_2_11 8416 9408 - 3.A.1.1.23
NULL(UNKNOWN) HRGMv2_2132_2 HRGMv2_2132_2_12 9475 10866 - NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_2132_2 HRGMv2_2132_2_13 10949 11968 - LacI
CAZyme HRGMv2_2132_2 HRGMv2_2132_2_14 12431 14866 + GH94
Gene ID: HRGMv2_2132_2_9
Type: TC
Location: 6907 - 7548 (-)
Gene ID: HRGMv2_2132_2_10
Type: TC
Location: 7554 - 8426 (-)
Gene ID: HRGMv2_2132_2_11
Type: TC
Location: 8416 - 9408 (-)
Gene ID: HRGMv2_2132_2_12
Type:
Location: 9475 - 10866 (-)
Gene ID: HRGMv2_2132_2_13
Type: TF
Location: 10949 - 11968 (-)
Gene ID: HRGMv2_2132_2_14
Type: CAZyme
Location: 12431 - 14866 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List