Cluster: HRGMv2_2132_CGC19
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_2132
- CGC Family ID: CGCFAM_00959
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2132_13 | HRGMv2_2132_13_17 | 14815 | 16119 | - | GH1 |
| CAZyme | HRGMv2_2132_13 | HRGMv2_2132_13_18 | 16366 | 18966 | - | CBM67 | GH78 |
| CAZyme | HRGMv2_2132_13 | HRGMv2_2132_13_19 | 19012 | 21426 | - | GH3 |
| TC | HRGMv2_2132_13 | HRGMv2_2132_13_20 | 21447 | 22919 | - | 2.A.2.3.6 |
| NULL(UNKNOWN) | HRGMv2_2132_13 | HRGMv2_2132_13_21 | 23061 | 23858 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_2132_13 | HRGMv2_2132_13_22 | 23845 | 24657 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2132_13 | HRGMv2_2132_13_23 | 24786 | 26273 | - | GH43_35 |
Gene ID: HRGMv2_2132_13_17
Type: CAZyme
Location: 14815 - 16119 (-)
Type: CAZyme
Location: 14815 - 16119 (-)
Gene ID: HRGMv2_2132_13_18
Type: CAZyme
Location: 16366 - 18966 (-)
Type: CAZyme
Location: 16366 - 18966 (-)
Gene ID: HRGMv2_2132_13_19
Type: CAZyme
Location: 19012 - 21426 (-)
Type: CAZyme
Location: 19012 - 21426 (-)
Gene ID: HRGMv2_2132_13_20
Type: TC
Location: 21447 - 22919 (-)
Type: TC
Location: 21447 - 22919 (-)
Gene ID: HRGMv2_2132_13_21
Type:
Location: 23061 - 23858 (-)
Type:
Location: 23061 - 23858 (-)
Gene ID: HRGMv2_2132_13_22
Type:
Location: 23845 - 24657 (-)
Type:
Location: 23845 - 24657 (-)
Gene ID: HRGMv2_2132_13_23
Type: CAZyme
Location: 24786 - 26273 (-)
Type: CAZyme
Location: 24786 - 26273 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pararoseburia
Species
Pararoseburia sp900546435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.