Cluster: HRGMv2_2132_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2132
- CGC Family ID: CGCFAM_03520
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2132_12 | HRGMv2_2132_12_79 | 91341 | 93713 | + | GH2 |
| pfam | HRGMv2_2132_12 | HRGMv2_2132_12_80 | 94011 | 95228 | + | Fe-ADH | Fe-ADH_2 | ADH_Fe_C |
| TC | HRGMv2_2132_12 | HRGMv2_2132_12_81 | 95709 | 97424 | + | 1.B.52.2.2 |
| NULL(UNKNOWN) | HRGMv2_2132_12 | HRGMv2_2132_12_82 | 97424 | 97567 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2132_12 | HRGMv2_2132_12_83 | 97628 | 99343 | + | 1.B.52.2.1 |
Gene ID: HRGMv2_2132_12_79
Type: CAZyme
Location: 91341 - 93713 (+)
Type: CAZyme
Location: 91341 - 93713 (+)
Gene ID: HRGMv2_2132_12_80
Type: pfam
Location: 94011 - 95228 (+)
Type: pfam
Location: 94011 - 95228 (+)
Gene ID: HRGMv2_2132_12_81
Type: TC
Location: 95709 - 97424 (+)
Type: TC
Location: 95709 - 97424 (+)
Gene ID: HRGMv2_2132_12_82
Type:
Location: 97424 - 97567 (+)
Type:
Location: 97424 - 97567 (+)
Gene ID: HRGMv2_2132_12_83
Type: TC
Location: 97628 - 99343 (+)
Type: TC
Location: 97628 - 99343 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pararoseburia
Species
Pararoseburia sp900546435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.