Cluster: HRGMv2_2132_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2132
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2132_12 | HRGMv2_2132_12_13 | 8663 | 10417 | + | 1.B.52.2.1 |
| pfam | HRGMv2_2132_12 | HRGMv2_2132_12_14 | 10509 | 11066 | + | EFP | EFP_N | Elong-fact-P_C |
| NULL(UNKNOWN) | HRGMv2_2132_12 | HRGMv2_2132_12_15 | 11075 | 11290 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2132_12 | HRGMv2_2132_12_16 | 11570 | 12325 | - | GH23 |
Gene ID: HRGMv2_2132_12_13
Type: TC
Location: 8663 - 10417 (+)
Type: TC
Location: 8663 - 10417 (+)
Gene ID: HRGMv2_2132_12_14
Type: pfam
Location: 10509 - 11066 (+)
Type: pfam
Location: 10509 - 11066 (+)
Gene ID: HRGMv2_2132_12_15
Type:
Location: 11075 - 11290 (+)
Type:
Location: 11075 - 11290 (+)
Gene ID: HRGMv2_2132_12_16
Type: CAZyme
Location: 11570 - 12325 (-)
Type: CAZyme
Location: 11570 - 12325 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pararoseburia
Species
Pararoseburia sp900546435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.