Cluster: HRGMv2_2132_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2132
- CGC Family ID: CGCFAM_02460
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2132_8 | HRGMv2_2132_8_39 | 38864 | 41731 | - | GH3 |
| TC | HRGMv2_2132_8 | HRGMv2_2132_8_40 | 41753 | 43537 | - | 8.A.7.1.1 |
| STP | HRGMv2_2132_8 | HRGMv2_2132_8_41 | 43479 | 43745 | - | PTS-HPr |
| CAZyme | HRGMv2_2132_8 | HRGMv2_2132_8_42 | 43765 | 45216 | - | GH1 |
| TC | HRGMv2_2132_8 | HRGMv2_2132_8_43 | 45216 | 46502 | - | 4.A.3.2.6 |
| TC | HRGMv2_2132_8 | HRGMv2_2132_8_44 | 46544 | 46846 | - | 4.A.3.2.6 |
| TC | HRGMv2_2132_8 | HRGMv2_2132_8_45 | 46857 | 47177 | - | 4.A.3.2.1 |
Gene ID: HRGMv2_2132_8_39
Type: CAZyme
Location: 38864 - 41731 (-)
Type: CAZyme
Location: 38864 - 41731 (-)
Gene ID: HRGMv2_2132_8_40
Type: TC
Location: 41753 - 43537 (-)
Type: TC
Location: 41753 - 43537 (-)
Gene ID: HRGMv2_2132_8_41
Type: STP
Location: 43479 - 43745 (-)
Type: STP
Location: 43479 - 43745 (-)
Gene ID: HRGMv2_2132_8_42
Type: CAZyme
Location: 43765 - 45216 (-)
Type: CAZyme
Location: 43765 - 45216 (-)
Gene ID: HRGMv2_2132_8_43
Type: TC
Location: 45216 - 46502 (-)
Type: TC
Location: 45216 - 46502 (-)
Gene ID: HRGMv2_2132_8_44
Type: TC
Location: 46544 - 46846 (-)
Type: TC
Location: 46544 - 46846 (-)
Gene ID: HRGMv2_2132_8_45
Type: TC
Location: 46857 - 47177 (-)
Type: TC
Location: 46857 - 47177 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pararoseburia
Species
Pararoseburia sp900546435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.