Cluster: HRGMv2_2132_CGC10
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2132
- CGC Family ID: CGCFAM_01899
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2132_7 | HRGMv2_2132_7_13 | 12162 | 13709 | + | 3.B.1.1.5 |
| pfam | HRGMv2_2132_7 | HRGMv2_2132_7_14 | 13728 | 14618 | + | HpcH_HpaI |
| CAZyme | HRGMv2_2132_7 | HRGMv2_2132_7_15 | 14655 | 15623 | + | GT2 |
Gene ID: HRGMv2_2132_7_13
Type: TC
Location: 12162 - 13709 (+)
Type: TC
Location: 12162 - 13709 (+)
Gene ID: HRGMv2_2132_7_14
Type: pfam
Location: 13728 - 14618 (+)
Type: pfam
Location: 13728 - 14618 (+)
Gene ID: HRGMv2_2132_7_15
Type: CAZyme
Location: 14655 - 15623 (+)
Type: CAZyme
Location: 14655 - 15623 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pararoseburia
Species
Pararoseburia sp900546435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.