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Cluster: HRGMv2_2128_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2128_1 HRGMv2_2128_1_482 523048 523683 - 9.B.28.1.8
NULL(UNKNOWN) HRGMv2_2128_1 HRGMv2_2128_1_483 523789 524112 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2128_1 HRGMv2_2128_1_484 524109 524459 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2128_1 HRGMv2_2128_1_485 524693 526879 - GH36
Gene ID: HRGMv2_2128_1_482
Type: TC
Location: 523048 - 523683 (-)
Gene ID: HRGMv2_2128_1_483
Type:
Location: 523789 - 524112 (-)
Gene ID: HRGMv2_2128_1_484
Type:
Location: 524109 - 524459 (-)
Gene ID: HRGMv2_2128_1_485
Type: CAZyme
Location: 524693 - 526879 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2128_1_482 vegan > omnivore 1.48387 0.00191
HRGMv2_2128_1_482 vegetarian > omnivore 1.61382 0.02942

🧭 Explore Read Mapping of CGC

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