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Cluster: HRGMv2_2128_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2128_1 HRGMv2_2128_1_470 509882 512026 - CBM48 | GH13_9
STP HRGMv2_2128_1 HRGMv2_2128_1_471 512266 513237 + PfkB
pfam HRGMv2_2128_1 HRGMv2_2128_1_472 513509 514450 - PMI_typeI_cat | MPI_cupin_dom
CAZyme HRGMv2_2128_1 HRGMv2_2128_1_473 514543 515565 - GH130_2
NULL(UNKNOWN) HRGMv2_2128_1 HRGMv2_2128_1_474 515567 515809 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2128_1 HRGMv2_2128_1_475 515788 516423 - GH130_1
pfam HRGMv2_2128_1 HRGMv2_2128_1_476 516416 517585 - GlcNAc_2-epim
TC HRGMv2_2128_1 HRGMv2_2128_1_477 517602 518531 - 3.A.1.1.30
Gene ID: HRGMv2_2128_1_470
Type: CAZyme
Location: 509882 - 512026 (-)
Gene ID: HRGMv2_2128_1_471
Type: STP
Location: 512266 - 513237 (+)
Gene ID: HRGMv2_2128_1_472
Type: pfam
Location: 513509 - 514450 (-)
Gene ID: HRGMv2_2128_1_473
Type: CAZyme
Location: 514543 - 515565 (-)
Gene ID: HRGMv2_2128_1_474
Type:
Location: 515567 - 515809 (-)
Gene ID: HRGMv2_2128_1_475
Type: CAZyme
Location: 515788 - 516423 (-)
Gene ID: HRGMv2_2128_1_476
Type: pfam
Location: 516416 - 517585 (-)
Gene ID: HRGMv2_2128_1_477
Type: TC
Location: 517602 - 518531 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2128_1_474 vegetarian > omnivore 1.23004 0.02942
HRGMv2_2128_1_477 vegetarian > vegan 1.60984 0.01287

🧭 Explore Read Mapping of CGC

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