Cluster: HRGMv2_2128_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2128
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2128_1 | HRGMv2_2128_1_458 | 492527 | 495325 | - | CBM67 | GH78 |
| TC | HRGMv2_2128_1 | HRGMv2_2128_1_459 | 495457 | 496797 | - | 2.A.2.3.2 |
| TF | HRGMv2_2128_1 | HRGMv2_2128_1_460 | 497079 | 498140 | + | HTH_AraC |
| pfam | HRGMv2_2128_1 | HRGMv2_2128_1_461 | 498115 | 499011 | - | EamA | EamA |
| TC | HRGMv2_2128_1 | HRGMv2_2128_1_462 | 499031 | 500314 | - | 2.A.115.2.14 |
Gene ID: HRGMv2_2128_1_458
Type: CAZyme
Location: 492527 - 495325 (-)
Type: CAZyme
Location: 492527 - 495325 (-)
Gene ID: HRGMv2_2128_1_459
Type: TC
Location: 495457 - 496797 (-)
Type: TC
Location: 495457 - 496797 (-)
Gene ID: HRGMv2_2128_1_460
Type: TF
Location: 497079 - 498140 (+)
Type: TF
Location: 497079 - 498140 (+)
Gene ID: HRGMv2_2128_1_461
Type: pfam
Location: 498115 - 499011 (-)
Type: pfam
Location: 498115 - 499011 (-)
Gene ID: HRGMv2_2128_1_462
Type: TC
Location: 499031 - 500314 (-)
Type: TC
Location: 499031 - 500314 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Blautia_A
Species
Blautia_A sp900066335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2128_1_458 | vegan > omnivore | 1.22788 | 0.00191 |
| HRGMv2_2128_1_458 | vegetarian > omnivore | 1.21248 | 0.02942 |
| HRGMv2_2128_1_459 | vegan > omnivore | 1.15258 | 0.00191 |
| HRGMv2_2128_1_460 | vegan > omnivore | 1.60362 | 0.00191 |
| HRGMv2_2128_1_460 | vegetarian > omnivore | 1.22196 | 0.02942 |