dbCAN HGM

Cluster: HRGMv2_2128_CGC5

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_2128_1	HRGMv2_2128_1_326	354542	355462	-	8.A.5.1.6
pfam	HRGMv2_2128_1	HRGMv2_2128_1_327	355814	357244	-	DUF4179
TF	HRGMv2_2128_1	HRGMv2_2128_1_328	357244	357762	-	GerE
CAZyme	HRGMv2_2128_1	HRGMv2_2128_1_329	357980	361108	-	GH38
NULL(UNKNOWN)	HRGMv2_2128_1	HRGMv2_2128_1_330	361139	361378	-	NULL(UNKNOWN) [View Structural Homologs]
TC	HRGMv2_2128_1	HRGMv2_2128_1_331	361496	362278	-	2.A.5.5.2

Gene ID: HRGMv2_2128_1_326
Type: TC
Location: 354542 - 355462 (-)

Gene ID: HRGMv2_2128_1_327
Type: pfam
Location: 355814 - 357244 (-)

Gene ID: HRGMv2_2128_1_328
Type: TF
Location: 357244 - 357762 (-)

Gene ID: HRGMv2_2128_1_329
Type: CAZyme
Location: 357980 - 361108 (-)

Gene ID: HRGMv2_2128_1_330
Type:
Location: 361139 - 361378 (-)

Gene ID: HRGMv2_2128_1_331
Type: TC
Location: 361496 - 362278 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_2128_1_326	vegan > omnivore	1.07582	0.00191
HRGMv2_2128_1_330	vegan > omnivore	3.14882	0.00191
HRGMv2_2128_1_330	vegetarian > omnivore	4.29642	0.02942
HRGMv2_2128_1_331	vegetarian > omnivore	1.51836	0.01276
HRGMv2_2128_1_331	vegetarian > vegan	1.34592	0.01287