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Cluster: HRGMv2_2128_CGC45

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2128_3 HRGMv2_2128_3_1034 1225082 1226827 + 3.A.1.21.1
TC HRGMv2_2128_3 HRGMv2_2128_3_1035 1226841 1228568 + 3.A.1.21.1
NULL(UNKNOWN) HRGMv2_2128_3 HRGMv2_2128_3_1036 1228798 1229484 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2128_3 HRGMv2_2128_3_1037 1229562 1231325 - 3.A.1.135.5
TC HRGMv2_2128_3 HRGMv2_2128_3_1038 1231322 1233088 - 3.A.1.135.5
TF HRGMv2_2128_3 HRGMv2_2128_3_1039 1233396 1234268 + HTH_1
TC HRGMv2_2128_3 HRGMv2_2128_3_1040 1234258 1236417 - 2.A.53.1.8
pfam HRGMv2_2128_3 HRGMv2_2128_3_1041 1236624 1237712 + tRNA_Me_trans | tRNA_Me_trans_C | tRNA_Me_trans_M
STP HRGMv2_2128_3 HRGMv2_2128_3_1042 1237974 1239281 + Aminotran_1_2
CAZyme HRGMv2_2128_3 HRGMv2_2128_3_1043 1239458 1240309 - CE4
Gene ID: HRGMv2_2128_3_1034
Type: TC
Location: 1225082 - 1226827 (+)
Gene ID: HRGMv2_2128_3_1035
Type: TC
Location: 1226841 - 1228568 (+)
Gene ID: HRGMv2_2128_3_1036
Type:
Location: 1228798 - 1229484 (+)
Gene ID: HRGMv2_2128_3_1037
Type: TC
Location: 1229562 - 1231325 (-)
Gene ID: HRGMv2_2128_3_1038
Type: TC
Location: 1231322 - 1233088 (-)
Gene ID: HRGMv2_2128_3_1039
Type: TF
Location: 1233396 - 1234268 (+)
Gene ID: HRGMv2_2128_3_1040
Type: TC
Location: 1234258 - 1236417 (-)
Gene ID: HRGMv2_2128_3_1041
Type: pfam
Location: 1236624 - 1237712 (+)
Gene ID: HRGMv2_2128_3_1042
Type: STP
Location: 1237974 - 1239281 (+)
Gene ID: HRGMv2_2128_3_1043
Type: CAZyme
Location: 1239458 - 1240309 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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