Cluster: HRGMv2_2128_CGC44
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2128
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2128_3 | HRGMv2_2128_3_1016 | 1199870 | 1202332 | + | 3.A.9.1.2 |
| NULL(UNKNOWN) | HRGMv2_2128_3 | HRGMv2_2128_3_1017 | 1202454 | 1202867 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_2128_3 | HRGMv2_2128_3_1018 | 1202861 | 1204231 | + | AAA |
| CAZyme | HRGMv2_2128_3 | HRGMv2_2128_3_1019 | 1204238 | 1205248 | + | GT2 |
| CAZyme | HRGMv2_2128_3 | HRGMv2_2128_3_1020 | 1205238 | 1206893 | + | GT2 |
| CAZyme | HRGMv2_2128_3 | HRGMv2_2128_3_1021 | 1206886 | 1208706 | + | GT2 |
Gene ID: HRGMv2_2128_3_1016
Type: TC
Location: 1199870 - 1202332 (+)
Type: TC
Location: 1199870 - 1202332 (+)
Gene ID: HRGMv2_2128_3_1017
Type:
Location: 1202454 - 1202867 (+)
Type:
Location: 1202454 - 1202867 (+)
Gene ID: HRGMv2_2128_3_1018
Type: STP
Location: 1202861 - 1204231 (+)
Type: STP
Location: 1202861 - 1204231 (+)
Gene ID: HRGMv2_2128_3_1019
Type: CAZyme
Location: 1204238 - 1205248 (+)
Type: CAZyme
Location: 1204238 - 1205248 (+)
Gene ID: HRGMv2_2128_3_1020
Type: CAZyme
Location: 1205238 - 1206893 (+)
Type: CAZyme
Location: 1205238 - 1206893 (+)
Gene ID: HRGMv2_2128_3_1021
Type: CAZyme
Location: 1206886 - 1208706 (+)
Type: CAZyme
Location: 1206886 - 1208706 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Blautia_A
Species
Blautia_A sp900066335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2128_3_1020 | vegan > omnivore | 1.43397 | 0.00191 |
| HRGMv2_2128_3_1020 | vegetarian > omnivore | 1.56163 | 0.02942 |