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Cluster: HRGMv2_2128_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2128_3 HRGMv2_2128_3_949 1130722 1132017 + 3.A.1.1.28
TC HRGMv2_2128_3 HRGMv2_2128_3_950 1132020 1132898 + 3.A.1.1.28
TC HRGMv2_2128_3 HRGMv2_2128_3_951 1132898 1133740 + 3.A.1.1.28
CAZyme HRGMv2_2128_3 HRGMv2_2128_3_952 1133768 1135948 + GH36
pfam HRGMv2_2128_3 HRGMv2_2128_3_953 1136037 1136915 - Aldose_epim
TC HRGMv2_2128_3 HRGMv2_2128_3_954 1137187 1139817 + 4.A.2.1.17
Gene ID: HRGMv2_2128_3_949
Type: TC
Location: 1130722 - 1132017 (+)
Gene ID: HRGMv2_2128_3_950
Type: TC
Location: 1132020 - 1132898 (+)
Gene ID: HRGMv2_2128_3_951
Type: TC
Location: 1132898 - 1133740 (+)
Gene ID: HRGMv2_2128_3_952
Type: CAZyme
Location: 1133768 - 1135948 (+)
Gene ID: HRGMv2_2128_3_953
Type: pfam
Location: 1136037 - 1136915 (-)
Gene ID: HRGMv2_2128_3_954
Type: TC
Location: 1137187 - 1139817 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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