Cluster: HRGMv2_2128_CGC33
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2128
- CGC Family ID: CGCFAM_02490
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2128_3 | HRGMv2_2128_3_341 | 421460 | 423925 | + | GH116 |
| STP | HRGMv2_2128_3 | HRGMv2_2128_3_342 | 423966 | 425279 | + | SBP_bac_1 |
| TC | HRGMv2_2128_3 | HRGMv2_2128_3_343 | 425295 | 426221 | + | 3.A.1.1.45 |
| TC | HRGMv2_2128_3 | HRGMv2_2128_3_344 | 426224 | 427066 | + | 3.A.1.1.18 |
| CAZyme | HRGMv2_2128_3 | HRGMv2_2128_3_345 | 427071 | 429389 | + | GH32 |
Gene ID: HRGMv2_2128_3_341
Type: CAZyme
Location: 421460 - 423925 (+)
Type: CAZyme
Location: 421460 - 423925 (+)
Gene ID: HRGMv2_2128_3_342
Type: STP
Location: 423966 - 425279 (+)
Type: STP
Location: 423966 - 425279 (+)
Gene ID: HRGMv2_2128_3_343
Type: TC
Location: 425295 - 426221 (+)
Type: TC
Location: 425295 - 426221 (+)
Gene ID: HRGMv2_2128_3_344
Type: TC
Location: 426224 - 427066 (+)
Type: TC
Location: 426224 - 427066 (+)
Gene ID: HRGMv2_2128_3_345
Type: CAZyme
Location: 427071 - 429389 (+)
Type: CAZyme
Location: 427071 - 429389 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Blautia_A
Species
Blautia_A sp900066335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2128_3_341 | vegetarian > vegan | 1.37510 | 0.01287 |
| HRGMv2_2128_3_342 | vegetarian > vegan | 1.53440 | 0.01287 |
| HRGMv2_2128_3_343 | vegetarian > vegan | 1.57885 | 0.01287 |
| HRGMv2_2128_3_344 | vegetarian > vegan | 1.40773 | 0.01287 |
| HRGMv2_2128_3_345 | vegetarian > vegan | 1.60099 | 0.01287 |