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Cluster: HRGMv2_2128_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2128_1 HRGMv2_2128_1_290 309845 310858 - GH177
TF HRGMv2_2128_1 HRGMv2_2128_1_291 311911 312954 - LacI
TF HRGMv2_2128_1 HRGMv2_2128_1_292 312982 314568 - HTH_AraC | HTH_AraC
TC HRGMv2_2128_1 HRGMv2_2128_1_293 314568 316307 - 8.A.59.2.1
TC HRGMv2_2128_1 HRGMv2_2128_1_294 316442 317812 - 2.A.2.3.2
Gene ID: HRGMv2_2128_1_290
Type: CAZyme
Location: 309845 - 310858 (-)
Gene ID: HRGMv2_2128_1_291
Type: TF
Location: 311911 - 312954 (-)
Gene ID: HRGMv2_2128_1_292
Type: TF
Location: 312982 - 314568 (-)
Gene ID: HRGMv2_2128_1_293
Type: TC
Location: 314568 - 316307 (-)
Gene ID: HRGMv2_2128_1_294
Type: TC
Location: 316442 - 317812 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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