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Cluster: HRGMv2_2128_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2128_3 HRGMv2_2128_3_57 65309 67822 + GH2
TC HRGMv2_2128_3 HRGMv2_2128_3_58 68020 69432 - 2.A.25.1.4
TF HRGMv2_2128_3 HRGMv2_2128_3_59 69718 70617 - HTH_1
TC HRGMv2_2128_3 HRGMv2_2128_3_60 70977 72242 + 2.A.47.5.2
pfam HRGMv2_2128_3 HRGMv2_2128_3_61 72463 73368 + Fumerase
pfam HRGMv2_2128_3 HRGMv2_2128_3_62 73389 74021 + Fumerase_C
TC HRGMv2_2128_3 HRGMv2_2128_3_63 74362 75003 + 2.A.115.2.12
Gene ID: HRGMv2_2128_3_57
Type: CAZyme
Location: 65309 - 67822 (+)
Gene ID: HRGMv2_2128_3_58
Type: TC
Location: 68020 - 69432 (-)
Gene ID: HRGMv2_2128_3_59
Type: TF
Location: 69718 - 70617 (-)
Gene ID: HRGMv2_2128_3_60
Type: TC
Location: 70977 - 72242 (+)
Gene ID: HRGMv2_2128_3_61
Type: pfam
Location: 72463 - 73368 (+)
Gene ID: HRGMv2_2128_3_62
Type: pfam
Location: 73389 - 74021 (+)
Gene ID: HRGMv2_2128_3_63
Type: TC
Location: 74362 - 75003 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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