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Cluster: HRGMv2_2128_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2128_2 HRGMv2_2128_2_303 337074 339170 + 8.A.59.4.2
pfam HRGMv2_2128_2 HRGMv2_2128_2_304 339225 339965 - Acyltransferase
pfam HRGMv2_2128_2 HRGMv2_2128_2_305 340108 340527 + PrcB_C
CAZyme HRGMv2_2128_2 HRGMv2_2128_2_306 340576 342123 + CBM50
pfam HRGMv2_2128_2 HRGMv2_2128_2_307 342238 343119 + GHMP_kinases_N | GHMP_kinases_C
TF HRGMv2_2128_2 HRGMv2_2128_2_308 343109 343810 + GntR
TC HRGMv2_2128_2 HRGMv2_2128_2_309 343779 345389 + 9.A.11.1.2
Gene ID: HRGMv2_2128_2_303
Type: TC
Location: 337074 - 339170 (+)
Gene ID: HRGMv2_2128_2_304
Type: pfam
Location: 339225 - 339965 (-)
Gene ID: HRGMv2_2128_2_305
Type: pfam
Location: 340108 - 340527 (+)
Gene ID: HRGMv2_2128_2_306
Type: CAZyme
Location: 340576 - 342123 (+)
Gene ID: HRGMv2_2128_2_307
Type: pfam
Location: 342238 - 343119 (+)
Gene ID: HRGMv2_2128_2_308
Type: TF
Location: 343109 - 343810 (+)
Gene ID: HRGMv2_2128_2_309
Type: TC
Location: 343779 - 345389 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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