Cluster: HRGMv2_2128_CGC21
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2128
- CGC Family ID: CGCFAM_01054
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2128_2 | HRGMv2_2128_2_232 | 250505 | 251362 | + | CE4 |
| CAZyme | HRGMv2_2128_2 | HRGMv2_2128_2_233 | 251365 | 252204 | + | CE4 |
| TC | HRGMv2_2128_2 | HRGMv2_2128_2_234 | 252245 | 253798 | + | 2.A.25.1.5 |
Gene ID: HRGMv2_2128_2_232
Type: CAZyme
Location: 250505 - 251362 (+)
Type: CAZyme
Location: 250505 - 251362 (+)
Gene ID: HRGMv2_2128_2_233
Type: CAZyme
Location: 251365 - 252204 (+)
Type: CAZyme
Location: 251365 - 252204 (+)
Gene ID: HRGMv2_2128_2_234
Type: TC
Location: 252245 - 253798 (+)
Type: TC
Location: 252245 - 253798 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Blautia_A
Species
Blautia_A sp900066335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2128_2_232 | vegan > omnivore | 1.14474 | 0.00191 |
| HRGMv2_2128_2_232 | vegetarian > omnivore | 1.18613 | 0.02942 |
| HRGMv2_2128_2_233 | vegan > omnivore | 1.11248 | 0.00191 |
| HRGMv2_2128_2_233 | vegetarian > omnivore | 1.00222 | 0.02942 |
| HRGMv2_2128_2_234 | vegan > omnivore | 1.95492 | 0.00191 |
| HRGMv2_2128_2_234 | vegetarian > omnivore | 2.14817 | 0.01276 |