Cluster: HRGMv2_2128_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2128
- CGC Family ID: CGCFAM_09967
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2128_1 | HRGMv2_2128_1_1085 | 1194018 | 1195109 | - | 9.A.23.1.1 |
| STP | HRGMv2_2128_1 | HRGMv2_2128_1_1086 | 1195235 | 1196359 | - | Fer4 |
| TC | HRGMv2_2128_1 | HRGMv2_2128_1_1087 | 1196715 | 1197320 | - | 2.A.115.2.12 |
| TF | HRGMv2_2128_1 | HRGMv2_2128_1_1088 | 1197430 | 1198275 | + | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_2128_1 | HRGMv2_2128_1_1089 | 1198291 | 1199922 | - | GH36 |
Gene ID: HRGMv2_2128_1_1085
Type: TC
Location: 1194018 - 1195109 (-)
Type: TC
Location: 1194018 - 1195109 (-)
Gene ID: HRGMv2_2128_1_1086
Type: STP
Location: 1195235 - 1196359 (-)
Type: STP
Location: 1195235 - 1196359 (-)
Gene ID: HRGMv2_2128_1_1087
Type: TC
Location: 1196715 - 1197320 (-)
Type: TC
Location: 1196715 - 1197320 (-)
Gene ID: HRGMv2_2128_1_1088
Type: TF
Location: 1197430 - 1198275 (+)
Type: TF
Location: 1197430 - 1198275 (+)
Gene ID: HRGMv2_2128_1_1089
Type: CAZyme
Location: 1198291 - 1199922 (-)
Type: CAZyme
Location: 1198291 - 1199922 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Blautia_A
Species
Blautia_A sp900066335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2128_1_1087 | vegan > omnivore | 2.41223 | 0.00191 |
| HRGMv2_2128_1_1087 | vegetarian > omnivore | 1.40387 | 0.02942 |