Cluster: HRGMv2_2128_CGC16
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2128
- CGC Family ID: CGCFAM_03924
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2128_1 | HRGMv2_2128_1_791 | 868481 | 869674 | + | 2.A.1.2.32 |
| CAZyme | HRGMv2_2128_1 | HRGMv2_2128_1_792 | 869883 | 872000 | - | GH36 |
| TF | HRGMv2_2128_1 | HRGMv2_2128_1_793 | 872228 | 873175 | + | HTH_AraC |
| TC | HRGMv2_2128_1 | HRGMv2_2128_1_794 | 873378 | 875453 | - | 3.A.3.32.3 |
| pfam | HRGMv2_2128_1 | HRGMv2_2128_1_795 | 875468 | 875812 | - | DUF6110 |
| TF | HRGMv2_2128_1 | HRGMv2_2128_1_796 | 876078 | 876536 | - | FUR |
| TC | HRGMv2_2128_1 | HRGMv2_2128_1_797 | 876873 | 877988 | + | 3.A.1.1.26 |
| TF | HRGMv2_2128_1 | HRGMv2_2128_1_798 | 878098 | 879183 | + | 0037176 |
| TC | HRGMv2_2128_1 | HRGMv2_2128_1_799 | 879269 | 880318 | - | 3.A.1.10.3 |
| TC | HRGMv2_2128_1 | HRGMv2_2128_1_800 | 880318 | 881013 | - | 3.A.1.8.1 |
Gene ID: HRGMv2_2128_1_791
Type: TC
Location: 868481 - 869674 (+)
Type: TC
Location: 868481 - 869674 (+)
Gene ID: HRGMv2_2128_1_792
Type: CAZyme
Location: 869883 - 872000 (-)
Type: CAZyme
Location: 869883 - 872000 (-)
Gene ID: HRGMv2_2128_1_793
Type: TF
Location: 872228 - 873175 (+)
Type: TF
Location: 872228 - 873175 (+)
Gene ID: HRGMv2_2128_1_794
Type: TC
Location: 873378 - 875453 (-)
Type: TC
Location: 873378 - 875453 (-)
Gene ID: HRGMv2_2128_1_795
Type: pfam
Location: 875468 - 875812 (-)
Type: pfam
Location: 875468 - 875812 (-)
Gene ID: HRGMv2_2128_1_796
Type: TF
Location: 876078 - 876536 (-)
Type: TF
Location: 876078 - 876536 (-)
Gene ID: HRGMv2_2128_1_797
Type: TC
Location: 876873 - 877988 (+)
Type: TC
Location: 876873 - 877988 (+)
Gene ID: HRGMv2_2128_1_798
Type: TF
Location: 878098 - 879183 (+)
Type: TF
Location: 878098 - 879183 (+)
Gene ID: HRGMv2_2128_1_799
Type: TC
Location: 879269 - 880318 (-)
Type: TC
Location: 879269 - 880318 (-)
Gene ID: HRGMv2_2128_1_800
Type: TC
Location: 880318 - 881013 (-)
Type: TC
Location: 880318 - 881013 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Blautia_A
Species
Blautia_A sp900066335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2128_1_791 | vegan > omnivore | 1.00466 | 0.00191 |
| HRGMv2_2128_1_791 | vegetarian > omnivore | 1.12751 | 0.02942 |
| HRGMv2_2128_1_796 | vegetarian > omnivore | 1.18219 | 0.02942 |